{"id":1266,"date":"2022-04-25T17:46:32","date_gmt":"2022-04-25T08:46:32","guid":{"rendered":"http:\/\/biochemistry.isc.chubu.ac.jp\/labo\/suzuki\/?p=1266"},"modified":"2022-04-25T17:46:32","modified_gmt":"2022-04-25T08:46:32","slug":"post-1266","status":"publish","type":"post","link":"http:\/\/biochemistry.isc.chubu.ac.jp\/labo\/suzuki\/archives\/1266","title":{"rendered":"\u30d5\u30a1\u30a4\u30eb\u3092\u4e00\u62ec\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9"},"content":{"rendered":"<p>\u6b21\u4e16\u4ee3\u30b7\u30fc\u30b1\u30f3\u30b5\u30fc\u306e\u30c7\u30fc\u30bf\u306f\u5de8\u5927\u3067\u3001\u30c7\u30fc\u30bf\u306e\u30b3\u30d4\u30fc\u3092\u3059\u308b\u306e\u3082\u4e00\u82e6\u52b4\u3067\u3059\u3002PoTHoS\u3084Mitsucal\u306b\u306ffastq\u30d5\u30a1\u30a4\u30eb\u3078\u306e\u30ea\u30f3\u30af\u3092\u3064\u3051\u3066\u3042\u308a\u307e\u3059\u304c\u3001\u4e00\u3064\u305a\u3064\u30af\u30ea\u30c3\u30af\u3057\u3066\u4fdd\u5b58\u3059\u308b\u306e\u306f\u5927\u5909\u3067\u3059\u3002Linux\u306e\u30c4\u30fc\u30eb\u3092\u4f7f\u3063\u3066\u697d\u3092\u3057\u307e\u3057\u3087\u3046\u3002<\/p>\n<h3>wget\u3092\u4f7f\u3046<\/h3>\n<p>wget\u306fHTML\u4e2d\u306e\u30ea\u30f3\u30af\u3092\u305f\u3069\u3063\u3066\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u3057\u3066\u304f\u308c\u307e\u3059\u3002\u30d5\u30a1\u30a4\u30eb\u3078\u306e\u30ea\u30f3\u30af\u304c\u3042\u308b\u30da\u30fc\u30b8(URL)\u3092\u4e0e\u3048\u308b\u3068\u3059\u3079\u3066\u306e\u30ea\u30f3\u30af\u5148\u3092\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u3057\u3066\u304f\u308c\u307e\u3059\u3002<\/p>\n<pre class=\"console\"># https:\/\/pothos.tsbio.info\/TfPT\/filer\/file\/ \u306efastq\u30d5\u30a1\u30a4\u30eb\u3092\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u3059\u308b\u4f8b\n$ wget --no-check-certificate --recursive --level 1 --no-clobber https:\/\/pothos.tsbio.info\/TfPT\/filer\/file\/\n<\/pre>\n<h4>\u30aa\u30d7\u30b7\u30e7\u30f3\u306e\u8aac\u660e (\u5148\u982d\u306e\u30cf\u30a4\u30d5\u30f3\u306f2\u500b\u3067\u3042\u308b\u3053\u3068\u306b\u6ce8\u610f)<\/h4>\n<dl>\n<dt>&#8211;no-check-certificate<\/dt>\n<dd>\u30b5\u30fc\u30d0\u30fc\u306e\u8a3c\u660e\u66f8\u306e\u691c\u8a3c\u3092\u884c\u308f\u306a\u3044\u3002<\/dd>\n<dt>&#8211;recursive<\/dt>\n<dd>\u518d\u5e30\u7684\u306b\u30d5\u30a1\u30a4\u30eb\u3092\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u3059\u308b\u3002wget\u306e\u6700\u521d\u306e\u5f15\u6570\u306eHTML\u30d5\u30a1\u30a4\u30eb\u306e\u4e2d\u8eab\u3092\u8abf\u3079\u3066\u5225\u306e\u30d5\u30a1\u30a4\u30eb\u3078\u306e\u30ea\u30f3\u30af\u304c\u3042\u308c\u3070\u305d\u308c\u3092\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u3059\u308b\u3002<\/dd>\n<dt>&#8211;level<\/dt>\n<dd>\u30ea\u30f3\u30af\u5148\u3092\u3069\u306e\u3050\u3089\u3044\u305f\u3069\u308b\u304b\u30021\u3092\u6307\u5b9a\u3059\u308b\u3053\u3068\u3067\u3001\u6700\u521d\u306e\u30da\u30fc\u30b8\u5185\u306e\u30ea\u30f3\u30af\u306b\u9650\u5b9a\u3059\u308b\u30025\u3068\u304b\u306b\u3059\u308b\u3068PoTHoS\u306e\u30c8\u30c3\u30d7\u30da\u30fc\u30b8\u304b\u3089\u3059\u3079\u3066\u3092\u305f\u3069\u3063\u3066\u3044\u304f\u306e\u3067\u5927\u5909\u306a\u3053\u3068\u306b\u306a\u308b\u3002<\/dd>\n<dt>&#8211;no-clobber<\/dt>\n<dd>\u4e00\u5ea6\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u3057\u305f\u30d5\u30a1\u30a4\u30eb\u306f\u518d\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u3057\u306a\u3044\u3002\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u3092\u5931\u6557\u3057\u305f\u5834\u5408\u306f\u3001\u305d\u306e\u30d5\u30a1\u30a4\u30eb\u3092\u524a\u9664\u3057\u3066\u3001\u3082\u3046\u4e00\u5ea6\u540c\u3058\u30b3\u30de\u30f3\u30c9\u3092\u5b9f\u884c\u3059\u308c\u3070\u3044\u3044\u3002<\/dd>\n<\/dl>\n<h3>curl\u3092\u4f7f\u3046<\/h3>\n<p>curl\u306f\u6700\u521d\u304b\u3089\u4f7f\u3048\u308b\u5834\u5408\u304c\u591a\u3044\u3067\u3059\u3002wget\u3088\u308a\u3082\u30e1\u30b8\u30e3\u30fc\u306a\u5370\u8c61\u3067\u3059\u3002wget\u306e\u3088\u3046\u306a\u518d\u5e30\u7684\u306b\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u3059\u308b\u30aa\u30d7\u30b7\u30e7\u30f3\u306f\u306a\u3055\u305d\u3046\u306a\u306e\u3067\u3001\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u3059\u308b\u30d5\u30a1\u30a4\u30eb\u3092\u5225\u306e\u30d5\u30a1\u30a4\u30eb(\u4e0b\u306e\u4f8b\u3067\u306ffilelist.txt)\u306b\u3044\u308c\u3066\u304a\u3044\u3066\u3001\u9806\u6b21\u30c0\u30a6\u30f3\u30ed\u30fc\u30c9\u3057\u3066\u307f\u307e\u3059\u3002<\/p>\n<pre class=\"console\">$ while read F ; do\n    if [ -n \"$F\" -a ! -f \"$F\" ] ; then\n        curl --insecure https:\/\/pothos.tsbio.info\/TfPT\/data\/filer\/$F -o $F\n    fi\ndone &lt;filelist.txt\n<\/pre>\n<h3>\u8a8d\u8a3c\u304c\u5fc5\u8981\u306a\u5834\u5408<\/h3>\n<p>curl\u3067\u8a8d\u8a3c\u60c5\u5831\u3092\u9001\u3063\u3066\u3001\u8fd4\u3063\u3066\u304f\u308b\u30af\u30c3\u30ad\u30fc\u3092\u30d5\u30a1\u30a4\u30eb(cookie_jar)\u306b\u3044\u308c\u3066\u3001\u6b21\u306e\u30a2\u30af\u30bb\u30b9\u3067\u306f\u305d\u308c\u3092\u9001\u308b\u3088\u3046\u306b\u3057\u307e\u3059\u3002<\/p>\n<h4>download.sh<\/h4>\n<pre class='code'>COOKIE_JAR=cookie_jar\nCURL_OPT=&quot;--insecure&quot;\n\ncurl $CURL_OPT --cookie-jar $COOKIE_JAR \\\n    --data-urlencode pothos_user_id=&quot;user@example.com&quot; \\\n    --data-urlencode password=my_secret \\\n    -o auth.html \\\n    https:\/\/pothos.tsbio.info\/auth\/login\/\n\n\nwhile read F ; do\n    if [ -n &quot;$F&quot; -a ! -f &quot;$F&quot; ] ; then\n        curl $CURL_OPT --cookie $COOKIE_JAR https:\/\/pothos.tsbio.info\/TfPT\/data\/filer\/$F -o $F\n    fi\ndone &lt;$1<\/pre>\n<pre class=\"console\">$ .\/download.sh filelist.txt<\/pre>\n<h4>\u30aa\u30d7\u30b7\u30e7\u30f3\u306e\u8aac\u660e<\/h4>\n<dl>\n<dt>&#8211;cookie-jar<\/dt>\n<dd>\u30b5\u30fc\u30d0\u30fc\u304b\u3089\u9001\u3089\u308c\u3066\u304f\u308b\u30af\u30c3\u30ad\u30fc\u3092\u4fdd\u5b58\u3059\u308b\u30d5\u30a1\u30a4\u30eb\u3002<\/dd>\n<dt>&#8211;data-urlencode<\/dt>\n<dd>\u30b5\u30fc\u30d0\u30fc\u306b\u30c7\u30fc\u30bf\u3092\u9001\u308b\u3002\u3053\u3053\u3067\u306f\u30ed\u30b0\u30a4\u30f3\u60c5\u5831\u3092\u5f15\u6570\u3068\u3057\u3066\u6307\u5b9a\u3057\u3066\u3044\u308b\u3002\u5927\u304d\u3044\u5834\u5408\u306f\u5225\u30d5\u30a1\u30a4\u30eb(\u4f8b\u3048\u3070post)\u306b\u3044\u308c\u3066\u304a\u3044\u3066\u3001&#8211;data-urlencode @post \u3068\u3059\u308b\u3053\u3068\u3082\u3067\u304d\u308b\u3002<\/dd>\n<dt>-o (\u5148\u982d\u306e\u30cf\u30a4\u30d5\u30f3\u306f\u4e00\u3064)<\/dt>\n<dd>\u30b5\u30fc\u30d0\u30fc\u304b\u3089\u306e\u8fd4\u4e8b\u3092\u3044\u308c\u3066\u304a\u304f\u30d5\u30a1\u30a4\u30eb\u3002\u4eca\u56de\u306f\u7279\u306b\u5fc5\u8981\u3067\u306a\u3044\u306e\u3067\u3001\/dev\/null\u3067\u3082\u3044\u3044\u304c\u3001\u30c7\u30d0\u30c3\u30b0\u7528\u306b\u4fdd\u5b58\u3057\u3066\u304a\u304f\u3002<\/dd>\n<\/dl>\n","protected":false},"excerpt":{"rendered":"<p>\u6b21\u4e16\u4ee3\u30b7\u30fc\u30b1\u30f3\u30b5\u30fc\u306e\u30c7\u30fc\u30bf\u306f\u5de8\u5927\u3067\u3001\u30c7\u30fc\u30bf\u306e\u30b3\u30d4\u30fc\u3092\u3059\u308b\u306e\u3082\u4e00\u82e6\u52b4\u3067\u3059\u3002PoTHoS\u3084Mitsucal\u306b\u306ffastq\u30d5\u30a1\u30a4\u30eb\u3078\u306e\u30ea\u30f3\u30af\u3092\u3064\u3051\u3066\u3042\u308a\u307e\u3059\u304c\u3001\u4e00\u3064\u305a\u3064\u30af\u30ea\u30c3\u30af\u3057\u3066\u4fdd\u5b58\u3059\u308b\u306e\u306f\u5927\u5909\u3067\u3059\u3002Linux\u306e\u30c4\u30fc\u30eb\u3092\u4f7f\u3063 [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[16],"tags":[],"_links":{"self":[{"href":"http:\/\/biochemistry.isc.chubu.ac.jp\/labo\/suzuki\/wp-json\/wp\/v2\/posts\/1266"}],"collection":[{"href":"http:\/\/biochemistry.isc.chubu.ac.jp\/labo\/suzuki\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"http:\/\/biochemistry.isc.chubu.ac.jp\/labo\/suzuki\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"http:\/\/biochemistry.isc.chubu.ac.jp\/labo\/suzuki\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"http:\/\/biochemistry.isc.chubu.ac.jp\/labo\/suzuki\/wp-json\/wp\/v2\/comments?post=1266"}],"version-history":[{"count":18,"href":"http:\/\/biochemistry.isc.chubu.ac.jp\/labo\/suzuki\/wp-json\/wp\/v2\/posts\/1266\/revisions"}],"predecessor-version":[{"id":1284,"href":"http:\/\/biochemistry.isc.chubu.ac.jp\/labo\/suzuki\/wp-json\/wp\/v2\/posts\/1266\/revisions\/1284"}],"wp:attachment":[{"href":"http:\/\/biochemistry.isc.chubu.ac.jp\/labo\/suzuki\/wp-json\/wp\/v2\/media?parent=1266"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"http:\/\/biochemistry.isc.chubu.ac.jp\/labo\/suzuki\/wp-json\/wp\/v2\/categories?post=1266"},{"taxonomy":"post_tag","embeddable":true,"href":"http:\/\/biochemistry.isc.chubu.ac.jp\/labo\/suzuki\/wp-json\/wp\/v2\/tags?post=1266"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}